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Species belonging to selected taxon:
Saccoglossus kowalevskii
ABOUT THIS RECORD
ID:
MNEST034908
species:
Saccoglossus kowalevskii
source:
miRBase, original name:
sko-mir-4818c
(
MI0017551
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATTGCACTTTACAGTGGTGTT
miRNA*
CGCCACTGGATTGCGCAATTAG
mismatches:
5
bulges:
0
View larger
pre-miRNA
CAAGAAAATCTGTTGTGTGGAA
CGCCACTGGATTGCGCAATTAG
TTAAGTAATTGATCT
AATTGCACTTTACAGTGGTGTT
CTAATCTCCAGCCTATCA
dot-bracket secondary structure
...((....(((..(..(((((
((((((((....(.((((((((
((((....)))).))
)))))).)....))))))))))
)))..)..)))....)).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"